Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.82■□□□□ 0.28
SCML4Q8N228 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SCML4Q8N228 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.82■□□□□ 0.28
SCML4Q8N228 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.82■□□□□ 0.28
SCML4Q8N228 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.82■□□□□ 0.28
SCML4Q8N228 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.82■□□□□ 0.28
SCML4Q8N228 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.82■□□□□ 0.28
SCML4Q8N228 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.82■□□□□ 0.28
SCML4Q8N228 RNA5SP421-201ENST00000516864 134 ntBASIC16.82■□□□□ 0.28
SCML4Q8N228 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.82■□□□□ 0.28
SCML4Q8N228 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.82■□□□□ 0.28
SCML4Q8N228 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.82■□□□□ 0.28
SCML4Q8N228 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SCML4Q8N228 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCML4Q8N228 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCML4Q8N228 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCML4Q8N228 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SCML4Q8N228 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCML4Q8N228 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.82■□□□□ 0.28
SCML4Q8N228 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.81■□□□□ 0.28
SCML4Q8N228 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCML4Q8N228 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SCML4Q8N228 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SCML4Q8N228 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCML4Q8N228 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SCML4Q8N228 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.81■□□□□ 0.28
SCML4Q8N228 BASP1P1-201ENST00000430708 665 ntBASIC16.81■□□□□ 0.28
SCML4Q8N228 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 AC004890.2-204ENST00000481968 304 ntBASIC16.81■□□□□ 0.28
SCML4Q8N228 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 AL844908.2-201ENST00000609461 460 ntBASIC16.81■□□□□ 0.28
SCML4Q8N228 AL033527.5-202ENST00000641632 1098 ntBASIC16.81■□□□□ 0.28
SCML4Q8N228 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SCML4Q8N228 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
SCML4Q8N228 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCML4Q8N228 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCML4Q8N228 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms