Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNI2Q6ZMN8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNI2Q6ZMN8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNI2Q6ZMN8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCNI2Q6ZMN8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNI2Q6ZMN8 AL031731.1-201ENST00000642131 2094 ntBASIC17.32■□□□□ 0.36
CCNI2Q6ZMN8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 FAM8A3P-201ENST00000427218 844 ntBASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 AL139288.1-201ENST00000623748 933 ntBASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 SSR4P1-203ENST00000599569 2260 ntBASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCNI2Q6ZMN8 AC006486.2-201ENST00000624246 2199 ntBASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 AC073592.5-201ENST00000624854 528 ntBASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNI2Q6ZMN8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNI2Q6ZMN8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms