Protein–RNA interactions for Protein: Q5T4F4

ZFYVE27, Protrudin, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE27Q5T4F4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 OR2I1P-210ENST00000642037 4691 ntBASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZFYVE27Q5T4F4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 AL596087.1-201ENST00000400979 1969 ntBASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 AC098831.1-202ENST00000438821 336 ntBASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 AL513480.1-201ENST00000451731 511 ntBASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 AP002469.2-201ENST00000531724 424 ntBASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 AL049840.3-201ENST00000602669 611 ntBASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 LINC01144-201ENST00000626198 1710 ntBASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.34■□□□□ 0.37
ZFYVE27Q5T4F4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 AC006449.6-201ENST00000612330 2296 ntBASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZFYVE27Q5T4F4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 CXCL1P1-201ENST00000502804 216 ntBASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZFYVE27Q5T4F4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZFYVE27Q5T4F4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZFYVE27Q5T4F4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZFYVE27Q5T4F4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZFYVE27Q5T4F4 MTHFR-217ENST00000641820 1569 ntBASIC17.32■□□□□ 0.36
ZFYVE27Q5T4F4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.32■□□□□ 0.36
ZFYVE27Q5T4F4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.32■□□□□ 0.36
ZFYVE27Q5T4F4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZFYVE27Q5T4F4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms