Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.26■□□□□ 0.19
LDLRAP1Q5SW96 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LDLRAP1Q5SW96 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 KRT18P32-201ENST00000424695 1287 ntBASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 AC098859.1-201ENST00000502915 1238 ntBASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 AP001160.2-201ENST00000596071 487 ntBASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 SPTSSB-204ENST00000617024 1292 ntBASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDLRAP1Q5SW96 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LDLRAP1Q5SW96 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms