Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.34■□□□□ 0.05
TRA2BP62995 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.34■□□□□ 0.05
TRA2BP62995 AP005117.1-202ENST00000581724 1908 ntBASIC15.34■□□□□ 0.05
TRA2BP62995 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRA2BP62995 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRA2BP62995 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 AC010491.1-201ENST00000563101 2797 ntBASIC15.34■□□□□ 0.05
TRA2BP62995 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRA2BP62995 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.34■□□□□ 0.05
TRA2BP62995 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRA2BP62995 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.34■□□□□ 0.05
TRA2BP62995 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.33■□□□□ 0.05
TRA2BP62995 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.33■□□□□ 0.05
TRA2BP62995 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRA2BP62995 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRA2BP62995 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRA2BP62995 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.33■□□□□ 0.05
TRA2BP62995 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRA2BP62995 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.33■□□□□ 0.05
TRA2BP62995 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRA2BP62995 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.33■□□□□ 0.04
TRA2BP62995 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.33■□□□□ 0.04
TRA2BP62995 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.33■□□□□ 0.04
TRA2BP62995 HLA-H-201ENST00000383620 1096 ntBASIC15.33■□□□□ 0.04
TRA2BP62995 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRA2BP62995 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.33■□□□□ 0.04
TRA2BP62995 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.33■□□□□ 0.04
TRA2BP62995 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.33■□□□□ 0.04
TRA2BP62995 TIMM8BP1-201ENST00000452384 211 ntBASIC15.33■□□□□ 0.04
TRA2BP62995 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRA2BP62995 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.33■□□□□ 0.04
TRA2BP62995 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.33■□□□□ 0.04
TRA2BP62995 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
TRA2BP62995 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.33■□□□□ 0.04
TRA2BP62995 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.33■□□□□ 0.04
TRA2BP62995 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.33■□□□□ 0.04
TRA2BP62995 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 LINC02199-201ENST00000506655 2702 ntBASIC15.33■□□□□ 0.04
TRA2BP62995 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.33■□□□□ 0.04
TRA2BP62995 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TRA2BP62995 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRA2BP62995 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRA2BP62995 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRA2BP62995 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRA2BP62995 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRA2BP62995 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRA2BP62995 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRA2BP62995 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRA2BP62995 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.32■□□□□ 0.04
TRA2BP62995 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TRA2BP62995 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TRA2BP62995 AL592309.1-201ENST00000443127 649 ntBASIC15.32■□□□□ 0.04
TRA2BP62995 CEND1P1-201ENST00000451006 455 ntBASIC15.32■□□□□ 0.04
TRA2BP62995 ALG1L5P-201ENST00000482043 771 ntBASIC15.32■□□□□ 0.04
TRA2BP62995 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRA2BP62995 YBX1P5-201ENST00000509441 847 ntBASIC15.32■□□□□ 0.04
TRA2BP62995 RNA5SP410-201ENST00000516285 106 ntBASIC15.32■□□□□ 0.04
TRA2BP62995 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.32■□□□□ 0.04
TRA2BP62995 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRA2BP62995 AC243562.2-201ENST00000561247 970 ntBASIC15.32■□□□□ 0.04
TRA2BP62995 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.32■□□□□ 0.04
TRA2BP62995 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.32■□□□□ 0.04
TRA2BP62995 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRA2BP62995 AC055717.3-201ENST00000622967 595 ntBASIC15.32■□□□□ 0.04
TRA2BP62995 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRA2BP62995 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.32■□□□□ 0.04
TRA2BP62995 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRA2BP62995 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRA2BP62995 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRA2BP62995 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
TRA2BP62995 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRA2BP62995 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.31■□□□□ 0.04
TRA2BP62995 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRA2BP62995 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.31■□□□□ 0.04
TRA2BP62995 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
TRA2BP62995 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.31■□□□□ 0.04
TRA2BP62995 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRA2BP62995 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRA2BP62995 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms