Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RIPPLY3P57055 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RIPPLY3P57055 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RIPPLY3P57055 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.55□□□□□ -0.24
RIPPLY3P57055 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RIPPLY3P57055 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RIPPLY3P57055 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RIPPLY3P57055 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 AP3S2-216ENST00000617003 1561 ntBASIC13.54□□□□□ -0.24
RIPPLY3P57055 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 AC091804.1-201ENST00000486888 567 ntBASIC13.54□□□□□ -0.24
RIPPLY3P57055 SLC25A6P2-201ENST00000497974 877 ntBASIC13.54□□□□□ -0.24
RIPPLY3P57055 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 AC009542.2-202ENST00000619004 1067 ntBASIC13.54□□□□□ -0.24
RIPPLY3P57055 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.54□□□□□ -0.24
RIPPLY3P57055 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIPPLY3P57055 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 ABALON-201ENST00000629058 1903 ntBASIC13.53□□□□□ -0.24
RIPPLY3P57055 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.53□□□□□ -0.24
RIPPLY3P57055 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 ACTG1P4-201ENST00000425123 1122 ntBASIC13.53□□□□□ -0.24
RIPPLY3P57055 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 RRP7BP-205ENST00000566851 833 ntBASIC13.53□□□□□ -0.24
RIPPLY3P57055 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 STK25P1-201ENST00000585406 838 ntBASIC13.53□□□□□ -0.24
RIPPLY3P57055 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIPPLY3P57055 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.53□□□□□ -0.24
RIPPLY3P57055 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms