Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
PTPN3P26045 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PTPN3P26045 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN3P26045 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PTPN3P26045 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 AC142381.1-201ENST00000426099 345 ntBASIC16.59■□□□□ 0.25
PTPN3P26045 ACTG1P14-201ENST00000446382 1122 ntBASIC16.59■□□□□ 0.25
PTPN3P26045 SPDYE11-202ENST00000450699 704 ntBASIC16.59■□□□□ 0.25
PTPN3P26045 AC245100.5-201ENST00000452108 331 ntBASIC16.59■□□□□ 0.25
PTPN3P26045 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.59■□□□□ 0.25
PTPN3P26045 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.59■□□□□ 0.25
PTPN3P26045 SPDYE9P-201ENST00000570642 692 ntBASIC16.59■□□□□ 0.25
PTPN3P26045 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN3P26045 SPDYE10P-202ENST00000612005 668 ntBASIC16.59■□□□□ 0.25
PTPN3P26045 SPDYE8P-202ENST00000612377 668 ntBASIC16.59■□□□□ 0.25
PTPN3P26045 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN3P26045 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN3P26045 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN3P26045 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN3P26045 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN3P26045 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTPN3P26045 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN3P26045 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.58■□□□□ 0.25
PTPN3P26045 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN3P26045 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN3P26045 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN3P26045 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.58■□□□□ 0.25
PTPN3P26045 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN3P26045 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PTPN3P26045 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.58■□□□□ 0.25
PTPN3P26045 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.58■□□□□ 0.25
PTPN3P26045 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
PTPN3P26045 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN3P26045 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PTPN3P26045 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
PTPN3P26045 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 HAUS4P1-201ENST00000406739 1145 ntBASIC16.58■□□□□ 0.24
PTPN3P26045 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 SPCS2P4-201ENST00000436160 681 ntBASIC16.58■□□□□ 0.24
PTPN3P26045 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PTPN3P26045 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.58■□□□□ 0.24
PTPN3P26045 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.58■□□□□ 0.24
PTPN3P26045 AC098859.1-201ENST00000502915 1238 ntBASIC16.58■□□□□ 0.24
PTPN3P26045 AC079140.1-201ENST00000508039 487 ntBASIC16.58■□□□□ 0.24
PTPN3P26045 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.58■□□□□ 0.24
PTPN3P26045 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.58■□□□□ 0.24
PTPN3P26045 LINC01225-203ENST00000563550 1244 ntBASIC16.58■□□□□ 0.24
PTPN3P26045 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.58■□□□□ 0.24
PTPN3P26045 SPTSSB-204ENST00000617024 1292 ntBASIC16.58■□□□□ 0.24
PTPN3P26045 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.58■□□□□ 0.24
PTPN3P26045 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.58■□□□□ 0.24
PTPN3P26045 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 AC132872.4-202ENST00000622924 2756 ntBASIC16.58■□□□□ 0.24
PTPN3P26045 PAUPAR-201ENST00000630360 2965 ntBASIC16.58■□□□□ 0.24
PTPN3P26045 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PTPN3P26045 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN3P26045 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms