Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SFTPBP07988 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 AL512652.2-201ENST00000625156 1716 ntBASIC14.24□□□□□ -0.13
SFTPBP07988 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 AP002414.2-201ENST00000591780 3365 ntBASIC14.24□□□□□ -0.13
SFTPBP07988 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.24□□□□□ -0.13
SFTPBP07988 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.24□□□□□ -0.13
SFTPBP07988 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.24□□□□□ -0.13
SFTPBP07988 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 AC073621.1-201ENST00000392730 636 ntBASIC14.24□□□□□ -0.13
SFTPBP07988 SLC25A6P2-201ENST00000497974 877 ntBASIC14.24□□□□□ -0.13
SFTPBP07988 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.24□□□□□ -0.13
SFTPBP07988 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 Z83851.2-201ENST00000609564 659 ntBASIC14.24□□□□□ -0.13
SFTPBP07988 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SFTPBP07988 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.24□□□□□ -0.13
SFTPBP07988 AL805961.1-202ENST00000641562 540 ntBASIC14.24□□□□□ -0.13
SFTPBP07988 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.24□□□□□ -0.13
SFTPBP07988 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.24□□□□□ -0.13
SFTPBP07988 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SFTPBP07988 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SFTPBP07988 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SFTPBP07988 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 AC097376.2-205ENST00000610159 5334 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.23□□□□□ -0.13
SFTPBP07988 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.23□□□□□ -0.13
SFTPBP07988 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 AC136632.2-201ENST00000512891 861 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 KRT18P58-201ENST00000527480 1120 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 UNC93B6-202ENST00000528242 690 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 AC034105.1-201ENST00000563488 319 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 AC145285.3-201ENST00000564603 959 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.23□□□□□ -0.13
SFTPBP07988 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.23□□□□□ -0.13
SFTPBP07988 AC005593.1-201ENST00000624894 515 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.23□□□□□ -0.13
SFTPBP07988 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.23□□□□□ -0.13
SFTPBP07988 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 AC024909.3-201ENST00000611513 2257 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.23□□□□□ -0.13
SFTPBP07988 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.23□□□□□ -0.13
SFTPBP07988 GGT3P-204ENST00000453783 1664 ntBASIC14.23□□□□□ -0.13
SFTPBP07988 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.23□□□□□ -0.13
SFTPBP07988 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SFTPBP07988 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SFTPBP07988 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms