Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
CD74P04233 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 SLC25A6P2-201ENST00000497974 877 ntBASIC13.72□□□□□ -0.21
CD74P04233 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.72□□□□□ -0.21
CD74P04233 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.72□□□□□ -0.21
CD74P04233 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.72□□□□□ -0.21
CD74P04233 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CD74P04233 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.72□□□□□ -0.21
CD74P04233 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 AC112693.3-201ENST00000624819 1983 ntBASIC13.72□□□□□ -0.21
CD74P04233 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD74P04233 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.71□□□□□ -0.21
CD74P04233 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CD74P04233 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CD74P04233 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.71□□□□□ -0.21
CD74P04233 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CD74P04233 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.71□□□□□ -0.21
CD74P04233 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CD74P04233 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.71□□□□□ -0.21
CD74P04233 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.71□□□□□ -0.21
CD74P04233 KRT18P57-201ENST00000443599 1254 ntBASIC13.71□□□□□ -0.21
CD74P04233 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 BX005266.1-201ENST00000473402 457 ntBASIC13.71□□□□□ -0.21
CD74P04233 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 AC107918.2-201ENST00000530817 355 ntBASIC13.71□□□□□ -0.21
CD74P04233 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.71□□□□□ -0.21
CD74P04233 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.71□□□□□ -0.21
CD74P04233 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.71□□□□□ -0.21
CD74P04233 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CD74P04233 AC005412.3-201ENST00000580309 715 ntBASIC13.71□□□□□ -0.21
CD74P04233 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.71□□□□□ -0.21
CD74P04233 AL589182.2-201ENST00000619332 1049 ntBASIC13.71□□□□□ -0.21
CD74P04233 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.71□□□□□ -0.21
CD74P04233 AL022326.1-202ENST00000641533 845 ntBASIC13.71□□□□□ -0.21
CD74P04233 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.71□□□□□ -0.21
CD74P04233 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD74P04233 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CD74P04233 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD74P04233 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD74P04233 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD74P04233 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD74P04233 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
CD74P04233 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD74P04233 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.71□□□□□ -0.22
CD74P04233 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 FLJ16779-201ENST00000612722 7638 ntBASIC13.7□□□□□ -0.22
CD74P04233 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 KRT18P1-202ENST00000452408 1331 ntBASIC13.7□□□□□ -0.22
CD74P04233 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.7□□□□□ -0.22
CD74P04233 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.7□□□□□ -0.22
CD74P04233 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD74P04233 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD74P04233 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.7□□□□□ -0.22
CD74P04233 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.7□□□□□ -0.22
CD74P04233 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD74P04233 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
CD74P04233 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.7□□□□□ -0.22
CD74P04233 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.7□□□□□ -0.22
CD74P04233 AC022616.7-201ENST00000525383 220 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms