Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 OR6D1P-203ENST00000641209 4860 ntBASIC16.72■□□□□ 0.27
COCHO43405 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COCHO43405 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
COCHO43405 FO393414.2-201ENST00000405153 598 ntBASIC16.72■□□□□ 0.27
COCHO43405 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.72■□□□□ 0.27
COCHO43405 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.72■□□□□ 0.27
COCHO43405 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.72■□□□□ 0.27
COCHO43405 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 AL662799.1-202ENST00000614205 422 ntBASIC16.72■□□□□ 0.27
COCHO43405 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COCHO43405 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COCHO43405 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COCHO43405 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
COCHO43405 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COCHO43405 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COCHO43405 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
COCHO43405 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
COCHO43405 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
COCHO43405 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 PCDHA14-201ENST00000506751 2298 ntBASIC16.71■□□□□ 0.27
COCHO43405 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.71■□□□□ 0.27
COCHO43405 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
COCHO43405 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.71■□□□□ 0.27
COCHO43405 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.71■□□□□ 0.27
COCHO43405 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.71■□□□□ 0.27
COCHO43405 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.71■□□□□ 0.27
COCHO43405 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 AC243562.2-201ENST00000561247 970 ntBASIC16.71■□□□□ 0.27
COCHO43405 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 AL132655.2-201ENST00000596276 594 ntBASIC16.71■□□□□ 0.27
COCHO43405 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 AC004461.2-201ENST00000629517 803 ntBASIC16.71■□□□□ 0.27
COCHO43405 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COCHO43405 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COCHO43405 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
COCHO43405 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.71■□□□□ 0.27
COCHO43405 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COCHO43405 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.71■□□□□ 0.27
COCHO43405 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COCHO43405 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
COCHO43405 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.71■□□□□ 0.26
COCHO43405 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COCHO43405 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
COCHO43405 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.7■□□□□ 0.26
COCHO43405 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.7■□□□□ 0.26
COCHO43405 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.7■□□□□ 0.26
COCHO43405 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
COCHO43405 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 AC007541.1-201ENST00000570282 1469 ntBASIC16.7■□□□□ 0.26
COCHO43405 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
COCHO43405 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.7■□□□□ 0.26
COCHO43405 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
COCHO43405 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.7■□□□□ 0.26
COCHO43405 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.7■□□□□ 0.26
COCHO43405 DOC2GP-202ENST00000514950 1163 ntBASIC16.7■□□□□ 0.26
COCHO43405 AP005018.1-201ENST00000525475 301 ntBASIC16.7■□□□□ 0.26
COCHO43405 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.7■□□□□ 0.26
COCHO43405 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms