Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 AL513523.2-202ENST00000427283 2040 ntBASIC17.03■□□□□ 0.32
PPARGC1AQ9UBK2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 KRT8P48-201ENST00000515599 1220 ntBASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 AL513210.1-201ENST00000629608 234 ntBASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PPARGC1AQ9UBK2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPARGC1AQ9UBK2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 AC254562.1-201ENST00000417586 456 ntBASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 AC079140.1-201ENST00000508039 487 ntBASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 AP000344.2-201ENST00000512987 629 ntBASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 AC008267.7-201ENST00000624570 1194 ntBASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 AC134684.3-201ENST00000641758 218 ntBASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms