Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 INTS4P1-201ENST00000438455 1935 ntBASIC14.17□□□□□ -0.14
RDH8Q9NYR8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RDH8Q9NYR8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 DRAXINP1-201ENST00000437611 948 ntBASIC14.16□□□□□ -0.14
RDH8Q9NYR8 KRT17P6-201ENST00000453795 1220 ntBASIC14.16□□□□□ -0.14
RDH8Q9NYR8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 TOB2P1-201ENST00000469761 992 ntBASIC14.16□□□□□ -0.14
RDH8Q9NYR8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 KRT18P21-201ENST00000515767 1272 ntBASIC14.16□□□□□ -0.14
RDH8Q9NYR8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 AL049597.2-201ENST00000565575 961 ntBASIC14.16□□□□□ -0.14
RDH8Q9NYR8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RDH8Q9NYR8 TUBB8P12-201ENST00000308911 1335 ntBASIC14.15□□□□□ -0.14
RDH8Q9NYR8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 TUBB7P-202ENST00000428444 1305 ntBASIC14.15□□□□□ -0.14
RDH8Q9NYR8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 TUBB8P7-204ENST00000567960 1332 ntBASIC14.15□□□□□ -0.14
RDH8Q9NYR8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 NSUN5P1-202ENST00000421140 1535 ntBASIC14.15□□□□□ -0.14
RDH8Q9NYR8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 NSUN5P2-203ENST00000457352 1529 ntBASIC14.15□□□□□ -0.14
RDH8Q9NYR8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.15□□□□□ -0.14
RDH8Q9NYR8 PMPCAP1-201ENST00000508114 1576 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms