Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PRYP6-201ENST00000514804 343 ntBASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 AC092865.6-201ENST00000642101 219 ntBASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC40Q9H9A6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 LINC02447-202ENST00000501888 2146 ntBASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 AL365330.1-201ENST00000607459 531 ntBASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 AC069224.1-201ENST00000566372 1715 ntBASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC40Q9H9A6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 PMS2P7-201ENST00000506558 1336 ntBASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 AC099522.2-201ENST00000607001 744 ntBASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRRC40Q9H9A6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 AC112504.1-201ENST00000623415 1841 ntBASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC40Q9H9A6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms