Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL031731.1-201ENST00000642131 2094 ntBASIC16.03■□□□□ 0.16
NPAS2Q99743 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
NPAS2Q99743 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.02■□□□□ 0.16
NPAS2Q99743 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS2Q99743 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.02■□□□□ 0.16
NPAS2Q99743 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.02■□□□□ 0.16
NPAS2Q99743 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NPAS2Q99743 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 AL591424.1-201ENST00000442569 1213 ntBASIC16.02■□□□□ 0.16
NPAS2Q99743 RPS15P9-201ENST00000494093 319 ntBASIC16.02■□□□□ 0.16
NPAS2Q99743 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPAS2Q99743 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NPAS2Q99743 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.02■□□□□ 0.16
NPAS2Q99743 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
NPAS2Q99743 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
NPAS2Q99743 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPAS2Q99743 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPAS2Q99743 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS2Q99743 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS2Q99743 AC108073.2-201ENST00000464002 357 ntBASIC16.01■□□□□ 0.15
NPAS2Q99743 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.01■□□□□ 0.15
NPAS2Q99743 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 IGHV3-65-201ENST00000523210 341 ntBASIC16.01■□□□□ 0.15
NPAS2Q99743 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.01■□□□□ 0.15
NPAS2Q99743 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS2Q99743 AC008667.4-201ENST00000607370 168 ntBASIC16.01■□□□□ 0.15
NPAS2Q99743 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.01■□□□□ 0.15
NPAS2Q99743 GPALPP1-207ENST00000611650 899 ntBASIC16.01■□□□□ 0.15
NPAS2Q99743 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.01■□□□□ 0.15
NPAS2Q99743 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.01■□□□□ 0.15
NPAS2Q99743 AL136379.1-201ENST00000623471 2642 ntBASIC16.01■□□□□ 0.15
NPAS2Q99743 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPAS2Q99743 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPAS2Q99743 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NPAS2Q99743 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
NPAS2Q99743 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPAS2Q99743 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.01■□□□□ 0.15
NPAS2Q99743 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NPAS2Q99743 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16■□□□□ 0.15
NPAS2Q99743 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16■□□□□ 0.15
NPAS2Q99743 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms