Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TUBB3P1-201ENST00000405796 1332 ntBASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 SPDYE14P-201ENST00000442619 822 ntBASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 AC125807.1-201ENST00000483097 614 ntBASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 AL512356.2-201ENST00000546955 174 ntBASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM48Q8IWZ4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 AC142381.1-201ENST00000426099 345 ntBASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM48Q8IWZ4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 HLA-H-201ENST00000383620 1096 ntBASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 KLF2P3-201ENST00000451977 1087 ntBASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRIM48Q8IWZ4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms