Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNKSR3Q6P9H4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AC068880.1-201ENST00000507289 2297 ntBASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 BCYRN1-201ENST00000418539 200 ntBASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNKSR3Q6P9H4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 AC090340.1-201ENST00000620778 4980 ntBASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 AC007551.1-201ENST00000457394 519 ntBASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 AC009486.1-201ENST00000569860 813 ntBASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CNKSR3Q6P9H4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms