Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 RPL13AP20-201ENST00000459725 609 ntBASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 CYP2AB1P-202ENST00000454440 1456 ntBASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CDC42BPAQ5VT25 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 AL133267.1-201ENST00000398220 340 ntBASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 HAUS4P1-201ENST00000406739 1145 ntBASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 AC079316.1-201ENST00000548397 411 ntBASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 ABBA01031663.1-201ENST00000635630 790 ntBASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 AC134312.5-201ENST00000568031 1313 ntBASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 RNU1-114P-201ENST00000365297 166 ntBASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 BRF1-202ENST00000379932 884 ntTSL 5 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDC42BPAQ5VT25 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 AC007969.1-201ENST00000433675 447 ntBASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 AP001063.1-201ENST00000568332 529 ntBASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 AC025279.2-201ENST00000569730 653 ntBASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDC42BPAQ5VT25 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDC42BPAQ5VT25 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 AC006033.1-201ENST00000440505 426 ntBASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 YBX1P6-201ENST00000442962 1002 ntBASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 AL590640.2-201ENST00000457038 527 ntBASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC24.1■■□□□ 1.45
CDC42BPAQ5VT25 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms