Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2NP61088 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UBE2NP61088 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 RBPMS2P1-201ENST00000437762 623 ntBASIC14.36□□□□□ -0.11
UBE2NP61088 METTL21AP1-201ENST00000438852 635 ntBASIC14.36□□□□□ -0.11
UBE2NP61088 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.36□□□□□ -0.11
UBE2NP61088 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2NP61088 SLC25A39P2-201ENST00000537614 270 ntBASIC14.36□□□□□ -0.11
UBE2NP61088 LINC01225-203ENST00000563550 1244 ntBASIC14.36□□□□□ -0.11
UBE2NP61088 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.36□□□□□ -0.11
UBE2NP61088 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
UBE2NP61088 AC073389.1-201ENST00000595595 795 ntBASIC14.36□□□□□ -0.11
UBE2NP61088 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.36□□□□□ -0.11
UBE2NP61088 AC027612.4-201ENST00000605371 583 ntBASIC14.36□□□□□ -0.11
UBE2NP61088 AC009093.7-201ENST00000623853 1223 ntBASIC14.36□□□□□ -0.11
UBE2NP61088 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.36□□□□□ -0.11
UBE2NP61088 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
UBE2NP61088 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2NP61088 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
UBE2NP61088 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UBE2NP61088 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 KRT18P28-201ENST00000453838 1332 ntBASIC14.36□□□□□ -0.11
UBE2NP61088 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
UBE2NP61088 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2NP61088 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UBE2NP61088 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2NP61088 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 AC092171.3-201ENST00000610122 2651 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.35□□□□□ -0.11
UBE2NP61088 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 AC092183.1-201ENST00000469884 875 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 AC098859.1-201ENST00000502915 1238 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 AC025678.2-201ENST00000562061 970 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 SPTSSB-204ENST00000617024 1292 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
UBE2NP61088 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
UBE2NP61088 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 U82695.1-201ENST00000635752 1889 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 AC018695.7-201ENST00000624587 2492 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2NP61088 AC005622.1-201ENST00000636801 1703 ntBASIC14.35□□□□□ -0.11
UBE2NP61088 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBE2NP61088 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2NP61088 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UBE2NP61088 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
UBE2NP61088 AL513477.1-201ENST00000602865 2407 ntBASIC14.34□□□□□ -0.11
UBE2NP61088 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms