Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 GPAA1P2-202ENST00000606848 1787 ntBASIC13.36□□□□□ -0.27
SPCS3P61009 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.36□□□□□ -0.27
SPCS3P61009 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SPCS3P61009 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 AL049597.2-201ENST00000565575 961 ntBASIC13.36□□□□□ -0.27
SPCS3P61009 MIR3180-1-201ENST00000580374 94 ntBASIC13.36□□□□□ -0.27
SPCS3P61009 MIR3180-3-201ENST00000584616 94 ntBASIC13.36□□□□□ -0.27
SPCS3P61009 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 AL139288.1-201ENST00000623748 933 ntBASIC13.36□□□□□ -0.27
SPCS3P61009 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.35□□□□□ -0.27
SPCS3P61009 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SPCS3P61009 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.35□□□□□ -0.27
SPCS3P61009 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 AP001269.4-201ENST00000609611 512 ntBASIC13.35□□□□□ -0.27
SPCS3P61009 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.35□□□□□ -0.27
SPCS3P61009 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.35□□□□□ -0.27
SPCS3P61009 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.35□□□□□ -0.27
SPCS3P61009 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.35□□□□□ -0.27
SPCS3P61009 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SPCS3P61009 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SPCS3P61009 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS3P61009 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.35□□□□□ -0.27
SPCS3P61009 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS3P61009 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms