Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.2
CPS1P31327 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
CPS1P31327 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CPS1P31327 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPS1P31327 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CPS1P31327 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 AC006001.1-201ENST00000325130 474 ntBASIC22.57■■□□□ 1.2
CPS1P31327 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC22.57■■□□□ 1.2
CPS1P31327 BRF1-202ENST00000379932 884 ntTSL 5 BASIC22.57■■□□□ 1.2
CPS1P31327 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
CPS1P31327 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 AC093433.1-201ENST00000458048 571 ntBASIC22.57■■□□□ 1.2
CPS1P31327 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC22.57■■□□□ 1.2
CPS1P31327 PAM16-215ENST00000577031 548 ntTSL 4 BASIC22.57■■□□□ 1.2
CPS1P31327 MIR4741-201ENST00000579822 90 ntBASIC22.57■■□□□ 1.2
CPS1P31327 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC22.57■■□□□ 1.2
CPS1P31327 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC22.57■■□□□ 1.2
CPS1P31327 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CPS1P31327 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC22.57■■□□□ 1.2
CPS1P31327 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CPS1P31327 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 ACR-203ENST00000529621 708 ntTSL 5 BASIC22.57■■□□□ 1.2
CPS1P31327 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC22.57■■□□□ 1.2
CPS1P31327 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC22.57■■□□□ 1.2
CPS1P31327 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPS1P31327 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPS1P31327 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPS1P31327 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPS1P31327 AC018735.1-201ENST00000437208 1502 ntBASIC22.56■■□□□ 1.2
CPS1P31327 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 AC141586.5-201ENST00000624546 2050 ntBASIC22.56■■□□□ 1.2
CPS1P31327 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CPS1P31327 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPS1P31327 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC22.56■■□□□ 1.2
CPS1P31327 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CPS1P31327 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CPS1P31327 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPS1P31327 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPS1P31327 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 AC074338.1-201ENST00000416825 156 ntBASIC22.56■■□□□ 1.2
CPS1P31327 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC22.56■■□□□ 1.2
CPS1P31327 NAT9-222ENST00000583476 583 ntTSL 3 BASIC22.56■■□□□ 1.2
CPS1P31327 MIR4750-201ENST00000584564 56 ntBASIC22.56■■□□□ 1.2
CPS1P31327 KLK3-207ENST00000595952 969 ntTSL 3 BASIC22.56■■□□□ 1.2
CPS1P31327 AL096828.3-201ENST00000615354 462 ntBASIC22.56■■□□□ 1.2
CPS1P31327 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPS1P31327 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 USE1-206ENST00000595101 1776 ntTSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CPS1P31327 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPS1P31327 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC22.56■■□□□ 1.2
CPS1P31327 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CPS1P31327 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CPS1P31327 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC22.55■■□□□ 1.2
CPS1P31327 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CPS1P31327 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CPS1P31327 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
CPS1P31327 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CPS1P31327 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC22.55■■□□□ 1.2
CPS1P31327 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC22.55■■□□□ 1.2
CPS1P31327 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC22.55■■□□□ 1.2
CPS1P31327 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC22.55■■□□□ 1.2
CPS1P31327 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CPS1P31327 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC22.55■■□□□ 1.2
CPS1P31327 AP001505.2-201ENST00000616815 443 ntBASIC22.55■■□□□ 1.2
CPS1P31327 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC22.55■■□□□ 1.2
CPS1P31327 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CPS1P31327 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC22.55■■□□□ 1.2
CPS1P31327 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPS1P31327 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC22.55■■□□□ 1.2
CPS1P31327 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.55■■□□□ 1.2
CPS1P31327 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.55■■□□□ 1.2
CPS1P31327 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms