Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.84□□□□□ -0.19
VAMP1P23763 POU5F1P6-201ENST00000466990 990 ntBASIC13.84□□□□□ -0.19
VAMP1P23763 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.84□□□□□ -0.19
VAMP1P23763 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.84□□□□□ -0.19
VAMP1P23763 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.84□□□□□ -0.19
VAMP1P23763 AC005336.2-201ENST00000593183 939 ntBASIC13.84□□□□□ -0.19
VAMP1P23763 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.84□□□□□ -0.19
VAMP1P23763 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC13.84□□□□□ -0.19
VAMP1P23763 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
VAMP1P23763 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.84□□□□□ -0.19
VAMP1P23763 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.84□□□□□ -0.19
VAMP1P23763 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.84□□□□□ -0.19
VAMP1P23763 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VAMP1P23763 AL512652.2-201ENST00000625156 1716 ntBASIC13.84□□□□□ -0.19
VAMP1P23763 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VAMP1P23763 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VAMP1P23763 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.84□□□□□ -0.19
VAMP1P23763 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VAMP1P23763 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
VAMP1P23763 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
VAMP1P23763 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VAMP1P23763 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VAMP1P23763 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VAMP1P23763 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.83□□□□□ -0.19
VAMP1P23763 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
VAMP1P23763 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.19
VAMP1P23763 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VAMP1P23763 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VAMP1P23763 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
VAMP1P23763 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
VAMP1P23763 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 SSR4P1-203ENST00000599569 2260 ntBASIC13.83□□□□□ -0.2
VAMP1P23763 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 SLC25A3P1-201ENST00000443844 931 ntBASIC13.83□□□□□ -0.2
VAMP1P23763 NUS1P1-201ENST00000446295 882 ntBASIC13.83□□□□□ -0.2
VAMP1P23763 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.83□□□□□ -0.2
VAMP1P23763 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.83□□□□□ -0.2
VAMP1P23763 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.83□□□□□ -0.2
VAMP1P23763 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.83□□□□□ -0.2
VAMP1P23763 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAMP1P23763 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.83□□□□□ -0.2
VAMP1P23763 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VAMP1P23763 PCGF3-213ENST00000620529 1899 ntBASIC13.82□□□□□ -0.2
VAMP1P23763 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAMP1P23763 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
VAMP1P23763 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAMP1P23763 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAMP1P23763 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAMP1P23763 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.82□□□□□ -0.2
VAMP1P23763 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms