Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.59■□□□□ 0.73
APPP05067 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APPP05067 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
APPP05067 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.59■□□□□ 0.73
APPP05067 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.59■□□□□ 0.73
APPP05067 AC092364.2-201ENST00000596710 2692 ntBASIC19.59■□□□□ 0.73
APPP05067 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APPP05067 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
APPP05067 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
APPP05067 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.59■□□□□ 0.73
APPP05067 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
APPP05067 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.59■□□□□ 0.73
APPP05067 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APPP05067 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APPP05067 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.59■□□□□ 0.73
APPP05067 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
APPP05067 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
APPP05067 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
APPP05067 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APPP05067 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.58■□□□□ 0.73
APPP05067 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.58■□□□□ 0.73
APPP05067 AP3S2-216ENST00000617003 1561 ntBASIC19.58■□□□□ 0.73
APPP05067 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
APPP05067 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
APPP05067 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.58■□□□□ 0.73
APPP05067 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APPP05067 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
APPP05067 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
APPP05067 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
APPP05067 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.58■□□□□ 0.72
APPP05067 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.58■□□□□ 0.72
APPP05067 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.58■□□□□ 0.72
APPP05067 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
APPP05067 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.58■□□□□ 0.72
APPP05067 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.58■□□□□ 0.72
APPP05067 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.58■□□□□ 0.72
APPP05067 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
APPP05067 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
APPP05067 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
APPP05067 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
APPP05067 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
APPP05067 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.58■□□□□ 0.72
APPP05067 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
APPP05067 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.58■□□□□ 0.72
APPP05067 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.58■□□□□ 0.72
APPP05067 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
APPP05067 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
APPP05067 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
APPP05067 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 AL589702.1-201ENST00000641229 1509 ntBASIC19.57■□□□□ 0.72
APPP05067 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
APPP05067 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.57■□□□□ 0.72
APPP05067 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
APPP05067 POU5F1P6-201ENST00000466990 990 ntBASIC19.57■□□□□ 0.72
APPP05067 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 RNA5SP410-201ENST00000516285 106 ntBASIC19.57■□□□□ 0.72
APPP05067 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.57■□□□□ 0.72
APPP05067 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.57■□□□□ 0.72
APPP05067 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.57■□□□□ 0.72
APPP05067 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.57■□□□□ 0.72
APPP05067 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 PCDH8P1-201ENST00000428983 2773 ntBASIC19.57■□□□□ 0.72
APPP05067 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.57■□□□□ 0.72
APPP05067 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
APPP05067 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
APPP05067 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.57■□□□□ 0.72
APPP05067 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
APPP05067 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.56■□□□□ 0.72
APPP05067 U82695.1-201ENST00000635752 1889 ntBASIC19.56■□□□□ 0.72
APPP05067 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.56■□□□□ 0.72
APPP05067 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.56■□□□□ 0.72
APPP05067 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
APPP05067 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.56■□□□□ 0.72
APPP05067 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
APPP05067 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 SPDYE14P-201ENST00000442619 822 ntBASIC19.56■□□□□ 0.72
APPP05067 RARRES2P9-201ENST00000565168 469 ntBASIC19.56■□□□□ 0.72
APPP05067 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.56■□□□□ 0.72
APPP05067 AC106028.4-201ENST00000614509 607 ntBASIC19.56■□□□□ 0.72
APPP05067 AP001059.3-201ENST00000619053 235 ntBASIC19.56■□□□□ 0.72
APPP05067 Z92544.3-201ENST00000624747 417 ntBASIC19.56■□□□□ 0.72
APPP05067 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.56■□□□□ 0.72
APPP05067 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms