Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
OPN1SWP03999 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.28■□□□□ 0.04
OPN1SWP03999 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
OPN1SWP03999 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.28■□□□□ 0.04
OPN1SWP03999 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.28■□□□□ 0.04
OPN1SWP03999 MRPL20P1-201ENST00000400819 433 ntBASIC15.28■□□□□ 0.04
OPN1SWP03999 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
OPN1SWP03999 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.28■□□□□ 0.04
OPN1SWP03999 UNC93B7-201ENST00000509439 705 ntBASIC15.28■□□□□ 0.04
OPN1SWP03999 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.28■□□□□ 0.04
OPN1SWP03999 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.28■□□□□ 0.04
OPN1SWP03999 OR7E47P-204ENST00000575924 449 ntBASIC15.28■□□□□ 0.04
OPN1SWP03999 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
OPN1SWP03999 AC004790.2-201ENST00000623588 572 ntBASIC15.28■□□□□ 0.04
OPN1SWP03999 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.28■□□□□ 0.04
OPN1SWP03999 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.28■□□□□ 0.04
OPN1SWP03999 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 AC023824.1-201ENST00000562945 2975 ntBASIC15.28■□□□□ 0.04
OPN1SWP03999 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
OPN1SWP03999 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPN1SWP03999 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 AL592424.1-201ENST00000563624 1536 ntBASIC15.27■□□□□ 0.04
OPN1SWP03999 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.27■□□□□ 0.04
OPN1SWP03999 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.27■□□□□ 0.04
OPN1SWP03999 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.27■□□□□ 0.04
OPN1SWP03999 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
OPN1SWP03999 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.27■□□□□ 0.04
OPN1SWP03999 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
OPN1SWP03999 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.27■□□□□ 0.04
OPN1SWP03999 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPN1SWP03999 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.27■□□□□ 0.04
OPN1SWP03999 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.27■□□□□ 0.04
OPN1SWP03999 AL160237.2-201ENST00000556165 472 ntBASIC15.27■□□□□ 0.04
OPN1SWP03999 AC105339.3-201ENST00000560043 636 ntBASIC15.27■□□□□ 0.04
OPN1SWP03999 ACTL9-202ENST00000612068 1252 ntBASIC15.27■□□□□ 0.04
OPN1SWP03999 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
OPN1SWP03999 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.27■□□□□ 0.04
OPN1SWP03999 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
OPN1SWP03999 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.27■□□□□ 0.03
OPN1SWP03999 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
OPN1SWP03999 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
OPN1SWP03999 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.27■□□□□ 0.03
OPN1SWP03999 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OPN1SWP03999 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.27■□□□□ 0.03
OPN1SWP03999 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.27■□□□□ 0.03
OPN1SWP03999 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
OPN1SWP03999 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
OPN1SWP03999 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
OPN1SWP03999 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
OPN1SWP03999 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPN1SWP03999 MIR648-201ENST00000385046 94 ntBASIC15.26■□□□□ 0.03
OPN1SWP03999 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
OPN1SWP03999 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.26■□□□□ 0.03
OPN1SWP03999 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.26■□□□□ 0.03
OPN1SWP03999 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.26■□□□□ 0.03
OPN1SWP03999 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms