Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC211476.1-201ENST00000503899 468 ntBASIC12.87□□□□□ -0.35
TRGV3P03979 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
TRGV3P03979 IGHV3-62-201ENST00000520057 340 ntBASIC12.87□□□□□ -0.35
TRGV3P03979 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.87□□□□□ -0.35
TRGV3P03979 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
TRGV3P03979 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.87□□□□□ -0.35
TRGV3P03979 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV3P03979 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TRGV3P03979 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.87□□□□□ -0.35
TRGV3P03979 AC023511.2-201ENST00000618803 211 ntBASIC12.87□□□□□ -0.35
TRGV3P03979 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRGV3P03979 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.87□□□□□ -0.35
TRGV3P03979 AC005052.1-201ENST00000625181 2492 ntBASIC12.87□□□□□ -0.35
TRGV3P03979 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.87□□□□□ -0.35
TRGV3P03979 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV3P03979 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.87□□□□□ -0.35
TRGV3P03979 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV3P03979 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
TRGV3P03979 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.86□□□□□ -0.35
TRGV3P03979 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 POU5F1P6-201ENST00000466990 990 ntBASIC12.86□□□□□ -0.35
TRGV3P03979 PRYP6-201ENST00000514804 343 ntBASIC12.86□□□□□ -0.35
TRGV3P03979 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.86□□□□□ -0.35
TRGV3P03979 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
TRGV3P03979 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.86□□□□□ -0.35
TRGV3P03979 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.86□□□□□ -0.35
TRGV3P03979 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 ME2P1-201ENST00000426028 1970 ntBASIC12.86□□□□□ -0.35
TRGV3P03979 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.86□□□□□ -0.35
TRGV3P03979 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
TRGV3P03979 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRGV3P03979 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms