Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AC148477.5-201ENST00000625164 1645 ntBASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 KRT8P26-201ENST00000534154 1276 ntBASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 TMEM191A-211ENST00000637163 1067 ntBASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 SNX33P1-201ENST00000592116 1762 ntBASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP3Q9Y2W7 AC023157.3-201ENST00000619086 2088 ntBASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 AC013268.4-201ENST00000637413 2228 ntBASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 GPAA1P2-202ENST00000606848 1787 ntBASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 AC113347.1-201ENST00000413321 391 ntBASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 SPDYE21P-201ENST00000413323 827 ntBASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 AC011498.5-201ENST00000592027 486 ntBASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP3Q9Y2W7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.71□□□□□ -0.22
KCNIP3Q9Y2W7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP3Q9Y2W7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms