Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 FO538757.1-201ENST00000623083 1397 ntBASIC21.74■■□□□ 1.07
CFAP53Q96M91 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 AL139010.1-201ENST00000454878 894 ntBASIC21.74■■□□□ 1.07
CFAP53Q96M91 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 AC073592.8-201ENST00000624126 511 ntBASIC21.74■■□□□ 1.07
CFAP53Q96M91 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP53Q96M91 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP53Q96M91 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 AC079328.2-201ENST00000561241 3354 ntBASIC21.73■■□□□ 1.07
CFAP53Q96M91 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 AC055876.3-201ENST00000431496 288 ntBASIC21.73■■□□□ 1.07
CFAP53Q96M91 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 AC138649.4-201ENST00000612222 287 ntBASIC21.73■■□□□ 1.07
CFAP53Q96M91 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CFAP53Q96M91 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CFAP53Q96M91 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CFAP53Q96M91 CETN4P-206ENST00000642099 2168 ntBASIC21.72■■□□□ 1.07
CFAP53Q96M91 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.72■■□□□ 1.07
CFAP53Q96M91 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP53Q96M91 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.72■■□□□ 1.07
CFAP53Q96M91 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CFAP53Q96M91 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP53Q96M91 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC21.72■■□□□ 1.07
CFAP53Q96M91 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CFAP53Q96M91 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP53Q96M91 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP53Q96M91 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP53Q96M91 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP53Q96M91 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP53Q96M91 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CFAP53Q96M91 MIR770-201ENST00000390219 98 ntBASIC21.72■■□□□ 1.07
CFAP53Q96M91 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms