Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.75■□□□□ 0.11
VPS33AQ96AX1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 AC008608.2-201ENST00000606089 416 ntBASIC15.75■□□□□ 0.11
VPS33AQ96AX1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VPS33AQ96AX1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 AC025062.2-201ENST00000605477 670 ntBASIC15.74■□□□□ 0.11
VPS33AQ96AX1 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 AP001350.2-201ENST00000625104 1094 ntBASIC15.74■□□□□ 0.11
VPS33AQ96AX1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VPS33AQ96AX1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 KRT18P31-201ENST00000506277 1292 ntBASIC15.73■□□□□ 0.11
VPS33AQ96AX1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VPS33AQ96AX1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms