Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX21Q969T3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
SNX21Q969T3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX21Q969T3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNX21Q969T3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.32■□□□□ 0.68
SNX21Q969T3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX21Q969T3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SNX21Q969T3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX21Q969T3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SNX21Q969T3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX21Q969T3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX21Q969T3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX21Q969T3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNX21Q969T3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX21Q969T3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX21Q969T3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX21Q969T3 TCAF2P1-201ENST00000291129 2421 ntBASIC19.32■□□□□ 0.68
SNX21Q969T3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX21Q969T3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SNX21Q969T3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX21Q969T3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.31■□□□□ 0.68
SNX21Q969T3 KRT18P21-201ENST00000515767 1272 ntBASIC19.31■□□□□ 0.68
SNX21Q969T3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SNX21Q969T3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.31■□□□□ 0.68
SNX21Q969T3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
SNX21Q969T3 AL365330.1-201ENST00000607459 531 ntBASIC19.31■□□□□ 0.68
SNX21Q969T3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.31■□□□□ 0.68
SNX21Q969T3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX21Q969T3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNX21Q969T3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX21Q969T3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX21Q969T3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
SNX21Q969T3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX21Q969T3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX21Q969T3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX21Q969T3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX21Q969T3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX21Q969T3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX21Q969T3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.3■□□□□ 0.68
SNX21Q969T3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SNX21Q969T3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX21Q969T3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX21Q969T3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX21Q969T3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX21Q969T3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX21Q969T3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX21Q969T3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
SNX21Q969T3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX21Q969T3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
SNX21Q969T3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SNX21Q969T3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX21Q969T3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNX21Q969T3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms