Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
APLFQ8IW19 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
APLFQ8IW19 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
APLFQ8IW19 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
APLFQ8IW19 ELK2BP-201ENST00000415014 1224 ntBASIC16.28■□□□□ 0.2
APLFQ8IW19 AC254562.1-201ENST00000417586 456 ntBASIC16.28■□□□□ 0.2
APLFQ8IW19 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 DDX43P3-201ENST00000441064 443 ntBASIC16.28■□□□□ 0.2
APLFQ8IW19 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.28■□□□□ 0.2
APLFQ8IW19 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.28■□□□□ 0.2
APLFQ8IW19 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.28■□□□□ 0.2
APLFQ8IW19 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
APLFQ8IW19 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.28■□□□□ 0.2
APLFQ8IW19 AC008667.4-201ENST00000607370 168 ntBASIC16.28■□□□□ 0.2
APLFQ8IW19 C20orf181-201ENST00000623918 480 ntBASIC16.28■□□□□ 0.2
APLFQ8IW19 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 AL049757.1-201ENST00000616842 1596 ntBASIC16.28■□□□□ 0.2
APLFQ8IW19 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.28■□□□□ 0.2
APLFQ8IW19 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.28■□□□□ 0.2
APLFQ8IW19 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
APLFQ8IW19 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APLFQ8IW19 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 REXO1L11P-201ENST00000620964 1927 ntBASIC16.27■□□□□ 0.2
APLFQ8IW19 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 KRT18P28-201ENST00000453838 1332 ntBASIC16.27■□□□□ 0.2
APLFQ8IW19 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 AC006504.4-201ENST00000592118 1568 ntBASIC16.27■□□□□ 0.2
APLFQ8IW19 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.27■□□□□ 0.2
APLFQ8IW19 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.27■□□□□ 0.2
APLFQ8IW19 VN2R19P-201ENST00000442399 1052 ntBASIC16.27■□□□□ 0.2
APLFQ8IW19 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 IGHV3-65-201ENST00000523210 341 ntBASIC16.27■□□□□ 0.2
APLFQ8IW19 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
APLFQ8IW19 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.27■□□□□ 0.2
APLFQ8IW19 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.27■□□□□ 0.2
APLFQ8IW19 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.27■□□□□ 0.2
APLFQ8IW19 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.27■□□□□ 0.2
APLFQ8IW19 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APLFQ8IW19 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
APLFQ8IW19 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APLFQ8IW19 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
APLFQ8IW19 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.19
APLFQ8IW19 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
APLFQ8IW19 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
APLFQ8IW19 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
APLFQ8IW19 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
APLFQ8IW19 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 AC132938.5-201ENST00000624980 1813 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 AL137784.3-201ENST00000623858 2288 ntBASIC16.26■□□□□ 0.19
APLFQ8IW19 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.26■□□□□ 0.19
APLFQ8IW19 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APLFQ8IW19 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms