Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP1Q04837 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 PMS2P1-201ENST00000431037 1228 ntBASIC13.84□□□□□ -0.19
SSBP1Q04837 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.84□□□□□ -0.19
SSBP1Q04837 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 AC087163.2-201ENST00000457299 853 ntBASIC13.84□□□□□ -0.19
SSBP1Q04837 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.84□□□□□ -0.19
SSBP1Q04837 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
SSBP1Q04837 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 AP005901.3-202ENST00000581653 237 ntBASIC13.84□□□□□ -0.19
SSBP1Q04837 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP1Q04837 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP1Q04837 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.84□□□□□ -0.19
SSBP1Q04837 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
SSBP1Q04837 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSBP1Q04837 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.84□□□□□ -0.19
SSBP1Q04837 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SSBP1Q04837 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSBP1Q04837 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSBP1Q04837 MROH4P-201ENST00000431302 1578 ntBASIC13.83□□□□□ -0.19
SSBP1Q04837 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
SSBP1Q04837 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.83□□□□□ -0.19
SSBP1Q04837 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.83□□□□□ -0.19
SSBP1Q04837 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSBP1Q04837 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSBP1Q04837 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSBP1Q04837 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 AC013726.1-201ENST00000563747 2285 ntBASIC13.83□□□□□ -0.2
SSBP1Q04837 AC105250.1-201ENST00000509378 2057 ntBASIC13.83□□□□□ -0.2
SSBP1Q04837 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 RCN1P2-201ENST00000398357 915 ntBASIC13.83□□□□□ -0.2
SSBP1Q04837 ABCD1P5-201ENST00000445663 754 ntBASIC13.83□□□□□ -0.2
SSBP1Q04837 AC245100.5-201ENST00000452108 331 ntBASIC13.83□□□□□ -0.2
SSBP1Q04837 MINOS1P3-201ENST00000457048 203 ntBASIC13.83□□□□□ -0.2
SSBP1Q04837 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 Z69720.1-201ENST00000601483 472 ntBASIC13.83□□□□□ -0.2
SSBP1Q04837 AC114341.1-201ENST00000618070 349 ntBASIC13.83□□□□□ -0.2
SSBP1Q04837 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP1Q04837 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP1Q04837 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP1Q04837 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SSBP1Q04837 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms