Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.69■□□□□ 0.58
CHMP4BP1P59074 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 AC140878.1-201ENST00000565277 250 ntBASIC18.69■□□□□ 0.58
CHMP4BP1P59074 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 MIR4453-201ENST00000584019 89 ntBASIC18.69■□□□□ 0.58
CHMP4BP1P59074 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 AC079328.2-201ENST00000561241 3354 ntBASIC18.68■□□□□ 0.58
CHMP4BP1P59074 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 AC091167.2-201ENST00000579581 588 ntBASIC18.68■□□□□ 0.58
CHMP4BP1P59074 MPDU1-223ENST00000582151 728 ntBASIC18.68■□□□□ 0.58
CHMP4BP1P59074 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHMP4BP1P59074 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 AC002472.2-201ENST00000442739 958 ntBASIC18.67■□□□□ 0.58
CHMP4BP1P59074 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 TERF1P3-201ENST00000505638 1227 ntBASIC18.67■□□□□ 0.58
CHMP4BP1P59074 AC069120.2-201ENST00000524091 540 ntBASIC18.67■□□□□ 0.58
CHMP4BP1P59074 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 AP000842.3-202ENST00000569238 1080 ntBASIC18.67■□□□□ 0.58
CHMP4BP1P59074 RN7SL204P-201ENST00000582831 262 ntBASIC18.67■□□□□ 0.58
CHMP4BP1P59074 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 AC008267.7-201ENST00000624570 1194 ntBASIC18.67■□□□□ 0.58
CHMP4BP1P59074 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP4BP1P59074 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms