Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 BX276092.2-201ENST00000417668 665 ntBASIC13.9□□□□□ -0.18
NKX2-5P52952 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX2-5P52952 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.9□□□□□ -0.18
NKX2-5P52952 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NKX2-5P52952 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 AC083964.2-201ENST00000623988 2396 ntBASIC13.9□□□□□ -0.18
NKX2-5P52952 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 AC092127.1-201ENST00000567093 3455 ntBASIC13.9□□□□□ -0.18
NKX2-5P52952 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 AC090616.6-203ENST00000579186 1945 ntBASIC13.9□□□□□ -0.18
NKX2-5P52952 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.9□□□□□ -0.19
NKX2-5P52952 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
NKX2-5P52952 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NKX2-5P52952 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NKX2-5P52952 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.9□□□□□ -0.19
NKX2-5P52952 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NKX2-5P52952 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-5P52952 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-5P52952 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
NKX2-5P52952 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-5P52952 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
NKX2-5P52952 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX2-5P52952 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 MIR4674-201ENST00000582457 87 ntBASIC13.89□□□□□ -0.19
NKX2-5P52952 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-5P52952 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
NKX2-5P52952 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.89□□□□□ -0.19
NKX2-5P52952 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
NKX2-5P52952 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-5P52952 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-5P52952 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-5P52952 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-5P52952 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-5P52952 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NKX2-5P52952 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-5P52952 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-5P52952 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-5P52952 CICP16-201ENST00000502609 2813 ntBASIC13.88□□□□□ -0.19
NKX2-5P52952 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-5P52952 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms