Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN1AP38936 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDKN1AP38936 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN1AP38936 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN1AP38936 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN1AP38936 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN1AP38936 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CDKN1AP38936 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.94□□□□□ -0.18
CDKN1AP38936 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.94□□□□□ -0.18
CDKN1AP38936 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 RPL37AP1-201ENST00000412502 279 ntBASIC13.94□□□□□ -0.18
CDKN1AP38936 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 AC098859.1-201ENST00000502915 1238 ntBASIC13.94□□□□□ -0.18
CDKN1AP38936 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.94□□□□□ -0.18
CDKN1AP38936 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 SPDYE22P-201ENST00000582158 798 ntBASIC13.94□□□□□ -0.18
CDKN1AP38936 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CDKN1AP38936 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKN1AP38936 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDKN1AP38936 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDKN1AP38936 SNX33P1-201ENST00000592116 1762 ntBASIC13.94□□□□□ -0.18
CDKN1AP38936 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDKN1AP38936 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 SPTLC1P1-201ENST00000447199 261 ntBASIC13.93□□□□□ -0.18
CDKN1AP38936 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKN1AP38936 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKN1AP38936 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 AC008738.7-201ENST00000609744 511 ntBASIC13.93□□□□□ -0.18
CDKN1AP38936 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms