Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC243591.1-201ENST00000452967 1364 ntBASIC16.44■□□□□ 0.22
LSP1P33241 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
LSP1P33241 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LSP1P33241 AC087499.1-201ENST00000418141 1075 ntBASIC16.44■□□□□ 0.22
LSP1P33241 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 TSPY15P-201ENST00000457163 923 ntBASIC16.44■□□□□ 0.22
LSP1P33241 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.44■□□□□ 0.22
LSP1P33241 MIR4492-201ENST00000581627 80 ntBASIC16.44■□□□□ 0.22
LSP1P33241 TERC-201ENST00000602385 541 ntBASIC16.44■□□□□ 0.22
LSP1P33241 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.44■□□□□ 0.22
LSP1P33241 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.44■□□□□ 0.22
LSP1P33241 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.44■□□□□ 0.22
LSP1P33241 AC105250.1-201ENST00000509378 2057 ntBASIC16.44■□□□□ 0.22
LSP1P33241 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LSP1P33241 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.44■□□□□ 0.22
LSP1P33241 KRT18P22-201ENST00000402024 1347 ntBASIC16.44■□□□□ 0.22
LSP1P33241 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.43■□□□□ 0.22
LSP1P33241 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LSP1P33241 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.43■□□□□ 0.22
LSP1P33241 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.43■□□□□ 0.22
LSP1P33241 TOP3BP1-201ENST00000420768 1380 ntBASIC16.43■□□□□ 0.22
LSP1P33241 LINC01568-207ENST00000641790 1380 ntBASIC16.43■□□□□ 0.22
LSP1P33241 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.43■□□□□ 0.22
LSP1P33241 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 HBZP1-201ENST00000354915 429 ntBASIC16.43■□□□□ 0.22
LSP1P33241 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.43■□□□□ 0.22
LSP1P33241 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LSP1P33241 AC005336.2-201ENST00000593183 939 ntBASIC16.43■□□□□ 0.22
LSP1P33241 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.43■□□□□ 0.22
LSP1P33241 AC133561.5-201ENST00000635547 218 ntBASIC16.43■□□□□ 0.22
LSP1P33241 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.43■□□□□ 0.22
LSP1P33241 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 AL592424.1-201ENST00000563624 1536 ntBASIC16.43■□□□□ 0.22
LSP1P33241 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.43■□□□□ 0.22
LSP1P33241 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSP1P33241 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.43■□□□□ 0.22
LSP1P33241 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LSP1P33241 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.42■□□□□ 0.22
LSP1P33241 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 C18orf15-201ENST00000623680 2534 ntBASIC16.42■□□□□ 0.22
LSP1P33241 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 SPDYE15P-201ENST00000424157 909 ntBASIC16.42■□□□□ 0.22
LSP1P33241 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 LINC01023-201ENST00000606054 436 ntBASIC16.42■□□□□ 0.22
LSP1P33241 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.42■□□□□ 0.22
LSP1P33241 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LSP1P33241 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.42■□□□□ 0.22
LSP1P33241 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LSP1P33241 AL137784.3-201ENST00000623858 2288 ntBASIC16.42■□□□□ 0.22
LSP1P33241 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSP1P33241 CYP2D8P-201ENST00000433633 1490 ntBASIC16.42■□□□□ 0.22
LSP1P33241 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LSP1P33241 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSP1P33241 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSP1P33241 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSP1P33241 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.41■□□□□ 0.22
LSP1P33241 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.41■□□□□ 0.22
LSP1P33241 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LSP1P33241 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSP1P33241 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms