Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NTF3P20783 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.49□□□□□ -0.41
NTF3P20783 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 AL049757.1-201ENST00000616842 1596 ntBASIC12.49□□□□□ -0.41
NTF3P20783 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.49□□□□□ -0.41
NTF3P20783 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NTF3P20783 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 AC103564.2-201ENST00000432853 1299 ntBASIC12.49□□□□□ -0.41
NTF3P20783 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 TSPY20P-201ENST00000450910 630 ntBASIC12.49□□□□□ -0.41
NTF3P20783 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.49□□□□□ -0.41
NTF3P20783 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NTF3P20783 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.49□□□□□ -0.41
NTF3P20783 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NTF3P20783 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.49□□□□□ -0.41
NTF3P20783 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 AP003680.1-201ENST00000598970 3660 ntBASIC12.48□□□□□ -0.41
NTF3P20783 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
NTF3P20783 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.48□□□□□ -0.41
NTF3P20783 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.48□□□□□ -0.41
NTF3P20783 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.48□□□□□ -0.41
NTF3P20783 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
NTF3P20783 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.48□□□□□ -0.41
NTF3P20783 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
NTF3P20783 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.48□□□□□ -0.41
NTF3P20783 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.48□□□□□ -0.41
NTF3P20783 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.48□□□□□ -0.41
NTF3P20783 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.48□□□□□ -0.41
NTF3P20783 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NTF3P20783 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms