Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.89■□□□□ 0.45
CLTAP09496 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLTAP09496 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLTAP09496 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 LINC01144-201ENST00000626198 1710 ntBASIC17.89■□□□□ 0.45
CLTAP09496 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.89■□□□□ 0.45
CLTAP09496 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.89■□□□□ 0.45
CLTAP09496 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.89■□□□□ 0.45
CLTAP09496 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLTAP09496 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLTAP09496 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.88■□□□□ 0.45
CLTAP09496 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.88■□□□□ 0.45
CLTAP09496 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CLTAP09496 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.88■□□□□ 0.45
CLTAP09496 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 AC093724.1-201ENST00000448659 1027 ntBASIC17.88■□□□□ 0.45
CLTAP09496 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.88■□□□□ 0.45
CLTAP09496 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.88■□□□□ 0.45
CLTAP09496 AL512356.2-201ENST00000546955 174 ntBASIC17.88■□□□□ 0.45
CLTAP09496 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.88■□□□□ 0.45
CLTAP09496 AP001059.3-201ENST00000619053 235 ntBASIC17.88■□□□□ 0.45
CLTAP09496 AC093028.1-201ENST00000622998 982 ntBASIC17.88■□□□□ 0.45
CLTAP09496 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLTAP09496 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.88■□□□□ 0.45
CLTAP09496 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.88■□□□□ 0.45
CLTAP09496 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLTAP09496 FOXO1B-201ENST00000504678 1527 ntBASIC17.88■□□□□ 0.45
CLTAP09496 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 AC103702.1-201ENST00000548801 2630 ntBASIC17.87■□□□□ 0.45
CLTAP09496 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 TSPY26P-202ENST00000565928 3884 ntBASIC17.87■□□□□ 0.45
CLTAP09496 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.87■□□□□ 0.45
CLTAP09496 AC098859.1-201ENST00000502915 1238 ntBASIC17.87■□□□□ 0.45
CLTAP09496 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 ALG1L8P-201ENST00000533887 760 ntBASIC17.87■□□□□ 0.45
CLTAP09496 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.87■□□□□ 0.45
CLTAP09496 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CLTAP09496 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.87■□□□□ 0.45
CLTAP09496 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 SPTSSB-204ENST00000617024 1292 ntBASIC17.87■□□□□ 0.45
CLTAP09496 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.87■□□□□ 0.45
CLTAP09496 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLTAP09496 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.87■□□□□ 0.45
CLTAP09496 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms