Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCNKO75909 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CCNKO75909 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.2□□□□□ -0.14
CCNKO75909 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.2□□□□□ -0.14
CCNKO75909 AC128676.1-201ENST00000454392 318 ntBASIC14.2□□□□□ -0.14
CCNKO75909 AC116562.2-201ENST00000507042 360 ntBASIC14.2□□□□□ -0.14
CCNKO75909 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.2□□□□□ -0.14
CCNKO75909 AC112497.1-201ENST00000624824 639 ntBASIC14.2□□□□□ -0.14
CCNKO75909 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCNKO75909 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.2□□□□□ -0.14
CCNKO75909 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.19□□□□□ -0.14
CCNKO75909 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 GPR89P-201ENST00000407924 1495 ntBASIC14.19□□□□□ -0.14
CCNKO75909 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.19□□□□□ -0.14
CCNKO75909 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.19□□□□□ -0.14
CCNKO75909 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 AC090192.1-201ENST00000517740 490 ntBASIC14.19□□□□□ -0.14
CCNKO75909 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.19□□□□□ -0.14
CCNKO75909 WWOX-216ENST00000569818 525 ntBASIC14.19□□□□□ -0.14
CCNKO75909 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CCNKO75909 AC010240.3-201ENST00000607688 395 ntBASIC14.19□□□□□ -0.14
CCNKO75909 REXO1L1P-202ENST00000608646 1974 ntBASIC14.19□□□□□ -0.14
CCNKO75909 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 GGT3P-204ENST00000453783 1664 ntBASIC14.19□□□□□ -0.14
CCNKO75909 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNKO75909 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCNKO75909 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNKO75909 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CCNKO75909 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
CCNKO75909 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNKO75909 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCNKO75909 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms