Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ACTN4O43707 AL513190.1-201ENST00000621254 727 ntBASIC18.31■□□□□ 0.52
ACTN4O43707 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.31■□□□□ 0.52
ACTN4O43707 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ACTN4O43707 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.31■□□□□ 0.52
ACTN4O43707 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACTN4O43707 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
ACTN4O43707 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
ACTN4O43707 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.3■□□□□ 0.52
ACTN4O43707 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.3■□□□□ 0.52
ACTN4O43707 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
ACTN4O43707 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ACTN4O43707 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.3■□□□□ 0.52
ACTN4O43707 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.3■□□□□ 0.52
ACTN4O43707 SLC25A1P1-201ENST00000528351 927 ntBASIC18.3■□□□□ 0.52
ACTN4O43707 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.3■□□□□ 0.52
ACTN4O43707 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.3■□□□□ 0.52
ACTN4O43707 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.3■□□□□ 0.52
ACTN4O43707 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.3■□□□□ 0.52
ACTN4O43707 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ACTN4O43707 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ACTN4O43707 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ACTN4O43707 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACTN4O43707 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.29■□□□□ 0.52
ACTN4O43707 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ACTN4O43707 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ACTN4O43707 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 AL589702.1-201ENST00000641229 1509 ntBASIC18.29■□□□□ 0.52
ACTN4O43707 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ACTN4O43707 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.29■□□□□ 0.52
ACTN4O43707 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ACTN4O43707 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.29■□□□□ 0.52
ACTN4O43707 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.29■□□□□ 0.52
ACTN4O43707 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.29■□□□□ 0.52
ACTN4O43707 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.29■□□□□ 0.52
ACTN4O43707 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ACTN4O43707 PDPK2P-202ENST00000562415 1191 ntBASIC18.29■□□□□ 0.52
ACTN4O43707 AP002472.1-201ENST00000577490 586 ntBASIC18.29■□□□□ 0.52
ACTN4O43707 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.29■□□□□ 0.52
ACTN4O43707 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ACTN4O43707 AL121894.2-201ENST00000602977 491 ntBASIC18.29■□□□□ 0.52
ACTN4O43707 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.29■□□□□ 0.52
ACTN4O43707 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.29■□□□□ 0.52
ACTN4O43707 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ACTN4O43707 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ACTN4O43707 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ACTN4O43707 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ACTN4O43707 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.28■□□□□ 0.52
ACTN4O43707 AC092384.3-202ENST00000564646 2873 ntBASIC18.28■□□□□ 0.52
ACTN4O43707 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ACTN4O43707 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ACTN4O43707 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.28■□□□□ 0.52
ACTN4O43707 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ACTN4O43707 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms