Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AC023824.1-201ENST00000562945 2975 ntBASIC16.62■□□□□ 0.25
CAPN8A6NHC0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 KRT18P34-201ENST00000488218 1270 ntBASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AC020765.3-201ENST00000613051 740 ntBASIC16.62■□□□□ 0.25
CAPN8A6NHC0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 AL513523.2-202ENST00000427283 2040 ntBASIC16.62■□□□□ 0.25
CAPN8A6NHC0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN8A6NHC0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 AC026120.1-201ENST00000611536 926 ntBASIC16.61■□□□□ 0.25
CAPN8A6NHC0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN8A6NHC0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 TFAMP1-201ENST00000412727 736 ntBASIC16.6■□□□□ 0.25
CAPN8A6NHC0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.6■□□□□ 0.25
CAPN8A6NHC0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms