Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 AC138969.3-201ENST00000546612 1459 ntBASIC14.23□□□□□ -0.13
MBD3L3A6NE82 AC138932.2-201ENST00000548268 1459 ntBASIC14.23□□□□□ -0.13
MBD3L3A6NE82 AC126755.4-201ENST00000549796 1459 ntBASIC14.23□□□□□ -0.13
MBD3L3A6NE82 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 KRT8P37-201ENST00000451609 1420 ntBASIC14.23□□□□□ -0.13
MBD3L3A6NE82 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L3A6NE82 Z97205.2-201ENST00000564697 1639 ntBASIC14.23□□□□□ -0.13
MBD3L3A6NE82 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 TIMM17BP1-201ENST00000545713 516 ntBASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AC023310.3-201ENST00000557027 670 ntBASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AC100756.1-201ENST00000562736 682 ntBASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AC138749.3-201ENST00000567691 622 ntBASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 CHCHD2P3-201ENST00000603038 451 ntBASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AC116165.1-201ENST00000611806 668 ntBASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AC022211.2-201ENST00000585075 2527 ntBASIC14.22□□□□□ -0.13
MBD3L3A6NE82 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L3A6NE82 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms