Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 AC007950.2-201ENST00000615045 2347 ntBASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 AC093512.1-201ENST00000617969 520 ntBASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.66
PTPDC1A2A3K4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 AC005622.1-201ENST00000636801 1703 ntBASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 SPCS2P4-201ENST00000436160 681 ntBASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 AC022188.1-201ENST00000620960 1664 ntBASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 AL365203.3-201ENST00000609742 2057 ntBASIC19.2■□□□□ 0.66
PTPDC1A2A3K4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 WASH6P-202ENST00000359512 1437 ntBASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 MIR770-201ENST00000390219 98 ntBASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 FAM58DP-201ENST00000428076 619 ntBASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 AL603832.2-201ENST00000566195 2125 ntBASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 UXT-AS1-201ENST00000590504 1525 ntBASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPDC1A2A3K4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPDC1A2A3K4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms