Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 AC027612.4-201ENST00000605371 583 ntBASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB6Q9Y5F9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB6Q9Y5F9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB6Q9Y5F9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHGB6Q9Y5F9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB6Q9Y5F9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.07
PCDHGB6Q9Y5F9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
PCDHGB6Q9Y5F9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB6Q9Y5F9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB6Q9Y5F9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 TSEN15P1-201ENST00000423257 515 ntBASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 AC092053.1-201ENST00000605787 1936 ntBASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB6Q9Y5F9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 AC078925.2-201ENST00000624013 1973 ntBASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 AC004461.1-201ENST00000412461 403 ntBASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 HLA-J-203ENST00000494367 1087 ntBASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 AC022145.2-201ENST00000598203 171 ntBASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PCDHGB6Q9Y5F9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB6Q9Y5F9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms