Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC138035.3-201ENST00000622706 2791 ntBASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 AC091167.2-201ENST00000579581 588 ntBASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 LINC01711-201ENST00000598340 967 ntBASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 AL121772.3-201ENST00000610840 674 ntBASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 AP001350.2-201ENST00000625104 1094 ntBASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDHB16Q9NRJ7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 SCARNA2-201ENST00000458748 420 ntBASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 BX005266.1-201ENST00000473402 457 ntBASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 PRELID1P1-202ENST00000567272 903 ntBASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHB16Q9NRJ7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHB16Q9NRJ7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms