Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 MIR4745-201ENST00000577608 62 ntBASIC17.25■□□□□ 0.35
ATP2A3Q93084 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 AC027307.2-201ENST00000591252 911 ntBASIC17.25■□□□□ 0.35
ATP2A3Q93084 AL390955.2-201ENST00000603032 514 ntBASIC17.25■□□□□ 0.35
ATP2A3Q93084 AC021097.1-201ENST00000607902 574 ntBASIC17.25■□□□□ 0.35
ATP2A3Q93084 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 AC138649.4-201ENST00000612222 287 ntBASIC17.25■□□□□ 0.35
ATP2A3Q93084 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ATP2A3Q93084 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A3Q93084 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 AC016027.1-202ENST00000607927 1699 ntBASIC17.24■□□□□ 0.35
ATP2A3Q93084 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 AL035633.1-201ENST00000406139 838 ntBASIC17.24■□□□□ 0.35
ATP2A3Q93084 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 INGX-202ENST00000489074 768 ntBASIC17.24■□□□□ 0.35
ATP2A3Q93084 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 SLC25A39P2-201ENST00000537614 270 ntBASIC17.24■□□□□ 0.35
ATP2A3Q93084 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 AP000842.3-202ENST00000569238 1080 ntBASIC17.24■□□□□ 0.35
ATP2A3Q93084 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A3Q93084 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A3Q93084 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A3Q93084 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A3Q93084 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms