Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC24.46■■□□□ 1.51
CCER1Q8TC90 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCER1Q8TC90 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.51
CCER1Q8TC90 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CCER1Q8TC90 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC24.45■■□□□ 1.5
CCER1Q8TC90 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CCER1Q8TC90 ACTL9-202ENST00000612068 1252 ntBASIC24.45■■□□□ 1.5
CCER1Q8TC90 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CCER1Q8TC90 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC24.45■■□□□ 1.5
CCER1Q8TC90 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CCER1Q8TC90 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC24.45■■□□□ 1.5
CCER1Q8TC90 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCER1Q8TC90 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCER1Q8TC90 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC24.44■■□□□ 1.5
CCER1Q8TC90 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCER1Q8TC90 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCER1Q8TC90 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CCER1Q8TC90 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCER1Q8TC90 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC24.44■■□□□ 1.5
CCER1Q8TC90 MRPL20P1-201ENST00000400819 433 ntBASIC24.44■■□□□ 1.5
CCER1Q8TC90 AC108073.2-201ENST00000464002 357 ntBASIC24.44■■□□□ 1.5
CCER1Q8TC90 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.44■■□□□ 1.5
CCER1Q8TC90 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCER1Q8TC90 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC24.44■■□□□ 1.5
CCER1Q8TC90 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CCER1Q8TC90 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCER1Q8TC90 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCER1Q8TC90 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC24.44■■□□□ 1.5
CCER1Q8TC90 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC24.44■■□□□ 1.5
CCER1Q8TC90 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCER1Q8TC90 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CCER1Q8TC90 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 FAM197Y8-203ENST00000450145 560 ntBASIC24.43■■□□□ 1.5
CCER1Q8TC90 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC24.43■■□□□ 1.5
CCER1Q8TC90 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCER1Q8TC90 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC24.42■■□□□ 1.5
CCER1Q8TC90 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCER1Q8TC90 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms