Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 LINC02228-204ENST00000642115 2962 ntBASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 UPK3BP1-201ENST00000428678 509 ntBASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 SCARNA2-201ENST00000458748 420 ntBASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 KRT18P31-201ENST00000506277 1292 ntBASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 AL732292.2-201ENST00000609649 430 ntBASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.46□□□□□ -0.09
DNAAF1Q8NEP3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 AC002310.6-201ENST00000624451 1377 ntBASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
DNAAF1Q8NEP3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 AP003680.1-201ENST00000598970 3660 ntBASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 TSPY19P-201ENST00000418461 509 ntBASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 TSPY18P-201ENST00000441642 509 ntBASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 AC004706.3-202ENST00000621574 984 ntBASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 AP005117.1-202ENST00000581724 1908 ntBASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNAAF1Q8NEP3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DNAAF1Q8NEP3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms