Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DENND1BQ6P3S1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
DENND1BQ6P3S1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 AC211486.1-202ENST00000416371 468 ntBASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 AC098859.1-201ENST00000502915 1238 ntBASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 AC211476.1-201ENST00000503899 468 ntBASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 SLC25A39P2-201ENST00000537614 270 ntBASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 AC134684.3-201ENST00000641758 218 ntBASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DENND1BQ6P3S1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 FAM58DP-201ENST00000428076 619 ntBASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 AC005237.2-201ENST00000434368 219 ntBASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 KRT8P23-201ENST00000560090 1207 ntBASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.27■□□□□ 0.36
DENND1BQ6P3S1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
DENND1BQ6P3S1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DENND1BQ6P3S1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
DENND1BQ6P3S1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.27■□□□□ 0.35
DENND1BQ6P3S1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DENND1BQ6P3S1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
DENND1BQ6P3S1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DENND1BQ6P3S1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms