Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 AL078644.1-201ENST00000609881 752 ntBASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 AC004877.2-201ENST00000623941 599 ntBASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 AC007064.4-201ENST00000637740 555 ntBASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 AC104109.2-201ENST00000602919 1418 ntBASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 AC025580.3-201ENST00000617932 1424 ntBASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 AC016027.1-202ENST00000607927 1699 ntBASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.82■□□□□ 0.12
LETMD1Q6P1Q0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 KRT18P34-201ENST00000488218 1270 ntBASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 AC008677.1-201ENST00000519230 1561 ntBASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 BCAR1-209ENST00000546196 1340 ntBASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 AC145285.3-201ENST00000564603 959 ntBASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 AC064836.3-201ENST00000607928 673 ntBASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LETMD1Q6P1Q0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 TPM4P1-201ENST00000436100 807 ntBASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 KRT18P2-201ENST00000447938 1258 ntBASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 KRT19P2-202ENST00000557173 1012 ntBASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LETMD1Q6P1Q0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LETMD1Q6P1Q0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.79■□□□□ 0.12
LETMD1Q6P1Q0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.79■□□□□ 0.12
LETMD1Q6P1Q0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LETMD1Q6P1Q0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms