Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 AC004461.1-201ENST00000412461 403 ntBASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 KRT8P23-201ENST00000560090 1207 ntBASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 MIR648-201ENST00000385046 94 ntBASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 IGHV3-62-201ENST00000520057 340 ntBASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 SLC25A39P2-201ENST00000537614 270 ntBASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 MIR4321-201ENST00000592276 80 ntBASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 AL365330.1-201ENST00000607459 531 ntBASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 AC084121.4-201ENST00000641598 221 ntBASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 AF228730.8-201ENST00000642140 221 ntBASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PTPN20Q4JDL3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 AL365203.3-201ENST00000609742 2057 ntBASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 AC093520.2-201ENST00000561830 333 ntBASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 UXT-AS1-201ENST00000590504 1525 ntBASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN20Q4JDL3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms