Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 AC069224.1-201ENST00000566372 1715 ntBASIC14.85□□□□□ -0.03
TMEM129A0AVI4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 ZNF259P1-201ENST00000407656 1365 ntBASIC14.85□□□□□ -0.03
TMEM129A0AVI4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TMEM129A0AVI4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 PCGF3-213ENST00000620529 1899 ntBASIC14.84□□□□□ -0.03
TMEM129A0AVI4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 AC136632.2-201ENST00000512891 861 ntBASIC14.84□□□□□ -0.03
TMEM129A0AVI4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 AL139424.1-201ENST00000607572 797 ntBASIC14.84□□□□□ -0.03
TMEM129A0AVI4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.84□□□□□ -0.03
TMEM129A0AVI4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM129A0AVI4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.84□□□□□ -0.03
TMEM129A0AVI4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM129A0AVI4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM129A0AVI4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.83□□□□□ -0.03
TMEM129A0AVI4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM129A0AVI4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM129A0AVI4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM129A0AVI4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.83□□□□□ -0.03
TMEM129A0AVI4 PPT1-215ENST00000641471 2368 ntBASIC14.83□□□□□ -0.03
TMEM129A0AVI4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 MIR648-201ENST00000385046 94 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 ELK2BP-201ENST00000415014 1224 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 PMS2P1-201ENST00000431037 1228 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 MIR4492-201ENST00000581627 80 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 AL353135.1-201ENST00000606729 504 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 Z83851.2-201ENST00000609564 659 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 MIR1199-201ENST00000621445 119 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 PGM5P2-202ENST00000637225 1043 ntBASIC14.83□□□□□ -0.04
TMEM129A0AVI4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM129A0AVI4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms